Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs1021487 chr4:59457085 C/T 0.000145 289 13.27 27.47 25.5 KM Plot
KIRP rs10218842 chr1:58997588 C/T 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs10222926 chr4:37690582 G/A 4.57E-6 288 25.57 29.87 16.45 KM Plot
KIRP rs10225882 chr7:148931313 C/G 1.69E-5 289 24.2 29.6 26.57 KM Plot
KIRP rs10274159 chr7:15462199 C/A 2.0E-12 284 26.37 24.67 6.28 KM Plot
KIRP rs1031512 chr3:16052811 T/G 2.94E-5 286 21.02 27.43 25.57 KM Plot
KIRP rs1035120 chr2:10321656 G/T 0.000176 289 29.55 21.97 19.33 KM Plot
KIRP rs10408596 chr19:19512657 A/T 5.0E-5 289 25.02 26.77 8.98 KM Plot
KIRP rs10408875 chr19:19503573 T/C 5.0E-5 289 25.02 26.77 8.98 KM Plot
KIRP rs10415849 chr19:19505087 C/T 5.0E-5 289 25.02 26.77 8.98 KM Plot
KIRP rs10424702 chr19:19508013 A/G 4.97E-5 287 25.23 27.1 8.98 KM Plot
KIRP rs10432175 chr18:32847061 C/T 6.03E-5 288 10.7 29.5 25.53 KM Plot
KIRP rs10455570 chr6:65838513 A/G 7.07E-10 285 26.37 22.17 13.07 KM Plot
KIRP rs1046234 chr4:16164453 G/C 1.28E-5 278 25.37 29.67 14.27 KM Plot
KIRP rs10469160 chr18:66123516 A/G 0.00019 289 16.5 20.53 26.37 KM Plot